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PTX3 pentraxin 3 [ Puma concolor (puma) ]

Gene ID: 112849376, updated on 15-Mar-2024

Summary

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Gene symbol
PTX3
Gene description
pentraxin 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020338336.1 (109185998..109198053, complement)

NW_020338336.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene solute carrier family 66 member 1 like Neighboring gene ventricular zone expressed PH domain containing 1 Neighboring gene uncharacterized LOC112850311 Neighboring gene cyclin L1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020338336 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables complement component C1q complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pentraxin-related protein PTX3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020338336.1 Reference PumCon1.0 Primary Assembly

    Range
    109185998..109198053 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025912998.1 → XP_025768783.1  pentraxin-related protein PTX3

    UniProtKB/TrEMBL
    A0A6P6GZI2
    Conserved Domains (1) summary
    cl22861
    Location:58 → 264
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
Nucleotide Protein
Heading Accession and Version

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