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APBA2 amyloid beta precursor protein binding family A member 2 [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112840017, updated on 15-Mar-2024

Summary

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Gene symbol
APBA2
Gene description
amyloid beta precursor protein binding family A member 2
See related
EnsemblRapid:ENSCURG00000019359
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020313004.1 (21262576..21389643, complement)

NW_020313004.1Genomic Context describing neighboring genes Neighboring gene endosomal transmembrane epsin interactor 2 Neighboring gene U4 spliceosomal RNA Neighboring gene NSE3 homolog, SMC5-SMC6 complex component Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 pseudogene Neighboring gene methylmalonyl-CoA epimerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020313004 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amyloid-beta binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amyloid-beta A4 precursor protein-binding family A member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020313004.1 Reference ASM326570v1 Primary Assembly

    Range
    21262576..21389643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025893209.1 → XP_025748994.1  amyloid-beta A4 precursor protein-binding family A member 2

    UniProtKB/TrEMBL
    A0A3Q7QTG6
    Related
    ENSCURP00000031505.1, ENSCURT00000036041.1
    Conserved Domains (4) summary
    PHA03169
    Location:119 → 321
    PHA03169; hypothetical protein; Provisional
    cd00992
    Location:662 → 735
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd01208
    Location:368 → 540
    PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
    pfam00595
    Location:573 → 656
    PDZ; PDZ domain (Also known as DHR or GLGF)
Nucleotide Protein
Heading Accession and Version

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