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CARMIL1 capping protein regulator and myosin 1 linker 1 [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112838187, updated on 15-Mar-2024

Summary

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Gene symbol
CARMIL1
Gene description
capping protein regulator and myosin 1 linker 1
See related
EnsemblRapid:ENSCURG00000017607
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
39
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312966.1 (24422090..24740277)

NW_020312966.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112838156 Neighboring gene RHO family interacting cell polarization regulator 2 Neighboring gene cytidine monophosphate-N-acetylneuraminic acid hydroxylase-like Neighboring gene uncharacterized LOC112838188 Neighboring gene histone H2A.J Neighboring gene secretagogin, EF-hand calcium binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020312966 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-actin-uncapping protein LRRC16A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020312966.1 Reference ASM326570v1 Primary Assembly

    Range
    24422090..24740277
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025890957.1 → XP_025746742.1  F-actin-uncapping protein LRRC16A

    UniProtKB/TrEMBL
    A0A3Q7QX12
    Related
    ENSCURP00000028783.1, ENSCURT00000032963.1
    Conserved Domains (6) summary
    sd00033
    Location:339 → 366
    LRR_RI; leucine-rich repeat [structural motif]
    sd00034
    Location:248 → 277
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam16000
    Location:786 → 1077
    CARMIL_C; CARMIL C-terminus
    cl25751
    Location:1216 → 1322
    DUF4045; Domain of unknown function (DUF4045)
    cl25758
    Location:1075 → 1324
    DUF4775; Domain of unknown function (DUF4775)
    cl26161
    Location:281 → 595
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
Nucleotide Protein
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