U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

UTP4 UTP4 small subunit processome component [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112836957, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
UTP4
Gene description
UTP4 small subunit processome component
See related
EnsemblRapid:ENSCURG00000015485
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See UTP4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312935.1 (4974470..5010250, complement)

NW_020312935.1Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting 4 homolog A Neighboring gene peptide deformylase, mitochondrial Neighboring gene syntrophin beta 2 Neighboring gene zinc finger protein 510 pseudogene Neighboring gene U7 small nuclear RNA Neighboring gene chromosome transmission fidelity factor 8 Neighboring gene hyaluronan synthase 3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020312935 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of t-UTP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
U3 small nucleolar RNA-associated protein 4 homolog

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020312935.1 Reference ASM326570v1 Primary Assembly

    Range
    4974470..5010250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025888972.1 → XP_025744757.1  U3 small nucleolar RNA-associated protein 4 homolog

    UniProtKB/TrEMBL
    A0A3Q7QRH3
    Related
    ENSCURP00000025228.1, ENSCURT00000028953.1
    Conserved Domains (3) summary
    COG2319
    Location:238 → 547
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:20 → 57
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:16 → 306
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.