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GATAD2A GATA zinc finger domain containing 2A [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112833562, updated on 15-Mar-2024

Summary

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Gene symbol
GATAD2A
Gene description
GATA zinc finger domain containing 2A
See related
EnsemblRapid:ENSCURG00000015029
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312913.1 (43848916..43951390, complement)

NW_020312913.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit A13 Neighboring gene testis specific serine kinase 6 Neighboring gene MAU2 sister chromatid cohesion factor Neighboring gene SURP and G-patch domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020312913 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NuRD complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional repressor p66-alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020312913.1 Reference ASM326570v1 Primary Assembly

    Range
    43848916..43951390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025884699.1 → XP_025740484.1  transcriptional repressor p66-alpha isoform X4

    UniProtKB/TrEMBL
    A0A3Q7Q3H6
    Conserved Domains (2) summary
    pfam00320
    Location:327 → 361
    GATA; GATA zinc finger
    pfam16563
    Location:46 → 82
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2

  2. XM_025884697.1 → XP_025740482.1  transcriptional repressor p66-alpha isoform X2

    UniProtKB/TrEMBL
    A0A3Q7QE74
    Conserved Domains (2) summary
    pfam00320
    Location:416 → 450
    GATA; GATA zinc finger
    pfam16563
    Location:135 → 171
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2

  3. XM_025884694.1 → XP_025740479.1  transcriptional repressor p66-alpha isoform X1

    UniProtKB/TrEMBL
    A0A3Q7Q306
    Related
    ENSCURP00000024503.1, ENSCURT00000028113.1
    Conserved Domains (2) summary
    pfam00320
    Location:423 → 457
    GATA; GATA zinc finger
    pfam16563
    Location:142 → 178
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2

  4. XM_025884695.1 → XP_025740480.1  transcriptional repressor p66-alpha isoform X1

    UniProtKB/TrEMBL
    A0A3Q7Q306
    Conserved Domains (2) summary
    pfam00320
    Location:423 → 457
    GATA; GATA zinc finger
    pfam16563
    Location:142 → 178
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2

  5. XM_025884696.1 → XP_025740481.1  transcriptional repressor p66-alpha isoform X1

    UniProtKB/TrEMBL
    A0A3Q7Q306
    Conserved Domains (2) summary
    pfam00320
    Location:423 → 457
    GATA; GATA zinc finger
    pfam16563
    Location:142 → 178
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2

  6. XM_025884698.1 → XP_025740483.1  transcriptional repressor p66-alpha isoform X3

    UniProtKB/TrEMBL
    A0A3Q7Q3N8
    Related
    ENSCURP00000024505.1, ENSCURT00000028116.1
    Conserved Domains (2) summary
    pfam00320
    Location:423 → 457
    GATA; GATA zinc finger
    pfam16563
    Location:142 → 178
    P66_CC; Coiled-coil and interaction region of P66A and P66B with MBD2
Nucleotide Protein
Heading Accession and Version

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