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UTP25 UTP25 small subunit processome component [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112828689, updated on 15-Mar-2024

Summary

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Gene symbol
UTP25
Gene description
UTP25 small subunit processome component
See related
EnsemblRapid:ENSCURG00000010067
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312885.1 (34584250..34606562, complement)

NW_020312885.1Genomic Context describing neighboring genes Neighboring gene SERTA domain containing 4 Neighboring gene synaptotagmin 14 Neighboring gene chromosome unknown C1orf74 homolog Neighboring gene interferon regulatory factor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020312885 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U3 snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
digestive organ expansion factor homolog
Names
UTP25 small subunit processor component

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020312885.1 Reference ASM326570v1 Primary Assembly

    Range
    34584250..34606562 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025877917.1 → XP_025733702.1  digestive organ expansion factor homolog

    UniProtKB/TrEMBL
    A0A3Q7PUN9
    Related
    ENSCURP00000016025.1, ENSCURT00000018648.1
    Conserved Domains (1) summary
    pfam06862
    Location:274 → 749
    UTP25; Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases