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HPGD 15-hydroxyprostaglandin dehydrogenase [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112826238, updated on 15-Mar-2024

Summary

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Gene symbol
HPGD
Gene description
15-hydroxyprostaglandin dehydrogenase
See related
EnsemblRapid:ENSCURG00000007463
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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See HPGD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312855.1 (56615944..56647279, complement)

NW_020312855.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 44 Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene transcription factor BTF3 pseudogene Neighboring gene coiled-coil domain-containing protein 93 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020312855 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
15-hydroxyprostaglandin dehydrogenase [NAD(+)]

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020312855.1 Reference ASM326570v1 Primary Assembly

    Range
    56615944..56647279 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025874481.1 → XP_025730266.1  15-hydroxyprostaglandin dehydrogenase [NAD(+)]

    UniProtKB/TrEMBL
    A0A3Q7QPK6
    Related
    ENSCURP00000011826.1, ENSCURT00000013836.1
    Conserved Domains (1) summary
    cd05323
    Location:6 → 254
    ADH_SDR_c_like; insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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