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USP38 ubiquitin specific peptidase 38 [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112826095, updated on 15-Mar-2024

Summary

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Gene symbol
USP38
Gene description
ubiquitin specific peptidase 38
See related
EnsemblRapid:ENSCURG00000007519
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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See USP38 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312855.1 (27614616..27655013)

NW_020312855.1Genomic Context describing neighboring genes Neighboring gene endoplasmic reticulum lectin 1 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene GRB2 associated binding protein 1 Neighboring gene 60S ribosomal protein L7a pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020312855 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 38

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020312855.1 Reference ASM326570v1 Primary Assembly

    Range
    27614616..27655013
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025874247.1 → XP_025730032.1  ubiquitin carboxyl-terminal hydrolase 38

    UniProtKB/TrEMBL
    A0A3Q7PJ21
    Related
    ENSCURP00000011938.1, ENSCURT00000013964.1
    Conserved Domains (1) summary
    cd02664
    Location:446 → 947
    Peptidase_C19H; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
Nucleotide Protein
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