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SP8 Sp8 transcription factor [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112824850, updated on 15-Mar-2024

Summary

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Gene symbol
SP8
Gene description
Sp8 transcription factor
See related
EnsemblRapid:ENSCURG00000004380
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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See SP8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312848.1 (34743461..34745983, complement)

NW_020312848.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene ATP binding cassette subfamily B member 5 Neighboring gene 10 kDa heat shock protein, mitochondrial Neighboring gene uncharacterized LOC112824966 Neighboring gene 5'-AMP-activated protein kinase subunit gamma-1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020312848 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor Sp8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020312848.1 Reference ASM326570v1 Primary Assembly

    Range
    34743461..34745983 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025872807.1 → XP_025728592.1  transcription factor Sp8

    UniProtKB/TrEMBL
    A0A3Q7PEN1
    Related
    ENSCURP00000006877.1, ENSCURT00000008186.1
    Conserved Domains (3) summary
    sd00017
    Location:379 → 398
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:434 → 456
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:420 → 443
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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