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DNAJC6 DnaJ heat shock protein family (Hsp40) member C6 [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112824048, updated on 15-Mar-2024

Summary

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Gene symbol
DNAJC6
Gene description
DnaJ heat shock protein family (Hsp40) member C6
See related
EnsemblRapid:ENSCURG00000001765
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312829.1 (16573473..16711896)

NW_020312829.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112823937 Neighboring gene cAMP-dependent protein kinase inhibitor gamma pseudogene Neighboring gene adenylate kinase 4 Neighboring gene leptin receptor overlapping transcript Neighboring gene leptin receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020312829 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in clathrin-dependent endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle uncoating IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative tyrosine-protein phosphatase auxilin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020312829.1 Reference ASM326570v1 Primary Assembly

    Range
    16573473..16711896
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025871902.1 → XP_025727687.1  putative tyrosine-protein phosphatase auxilin

    UniProtKB/TrEMBL
    A0A3Q7PBW6
    Related
    ENSCURP00000002543.1, ENSCURT00000003098.1
    Conserved Domains (4) summary
    cd06257
    Location:848 → 893
    DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
    PHA03247
    Location:452 → 752
    PHA03247; large tegument protein UL36; Provisional
    pfam10409
    Location:213 → 351
    PTEN_C2; C2 domain of PTEN tumor-suppressor protein
    cd14563
    Location:43 → 205
    PTP_auxilin_N; N-terminal protein tyrosine phosphatase-like domain of auxilin
Nucleotide Protein
Heading Accession and Version

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