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SPAG1 sperm associated antigen 1 [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112823277, updated on 15-Mar-2024

Summary

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Gene symbol
SPAG1
Gene description
sperm associated antigen 1
See related
EnsemblRapid:ENSCURG00000005258
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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See SPAG1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312828.1 (46391578..46456398)

NW_020312828.1Genomic Context describing neighboring genes Neighboring gene F-box protein 43 Neighboring gene RNA polymerase II, I and III subunit K Neighboring gene 40S ribosomal protein S2 pseudogene Neighboring gene ring finger protein 19A, RBR E3 ubiquitin protein ligase Neighboring gene translation initiation factor IF-2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020312828 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heat shock protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein targeting to mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sperm-associated antigen 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020312828.1 Reference ASM326570v1 Primary Assembly

    Range
    46391578..46456398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025870912.1 → XP_025726697.1  sperm-associated antigen 1

    UniProtKB/TrEMBL
    A0A3Q7P8Z3
    Related
    ENSCURP00000008390.1, ENSCURT00000009908.1
    Conserved Domains (3) summary
    sd00006
    Location:655 → 682
    TPR; TPR repeat [structural motif]
    pfam13877
    Location:835 → 923
    RPAP3_C; Potential Monad-binding region of RPAP3
    cl26005
    Location:160 → 357
    PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
Nucleotide Protein
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