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MYRIP myosin VIIA and Rab interacting protein [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112823202, updated on 15-Mar-2024

Summary

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Gene symbol
MYRIP
Gene description
myosin VIIA and Rab interacting protein
See related
EnsemblRapid:ENSCURG00000001109
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312785.1 (139628984..139969422, complement)

NW_020312785.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112833007 Neighboring gene eukaryotic translation initiation factor 1B Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 pseudogene Neighboring gene nucleolar and spindle-associated protein 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020312785 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables myosin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rab effector MyRIP

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020312785.1 Reference ASM326570v1 Primary Assembly

    Range
    139628984..139969422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025870805.1 → XP_025726590.1  rab effector MyRIP isoform X2

    UniProtKB/TrEMBL
    A0A3Q7NYP4
    Related
    ENSCURP00000001633.1, ENSCURT00000002024.1
    Conserved Domains (2) summary
    pfam02318
    Location:8 → 125
    FYVE_2; FYVE-type zinc finger
    pfam04698
    Location:152 → 792
    Rab_eff_C; Rab effector MyRIP/melanophilin C-terminus

  2. XM_025870798.1 → XP_025726583.1  rab effector MyRIP isoform X1

    UniProtKB/TrEMBL
    A0A3Q7NZB8
    Related
    ENSCURP00000001618.1, ENSCURT00000002003.1
    Conserved Domains (2) summary
    pfam02318
    Location:8 → 125
    FYVE_2; FYVE-type zinc finger
    pfam04698
    Location:152 → 857
    Rab_eff_C; Rab effector MyRIP/melanophilin C-terminus
Nucleotide Protein
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