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ESR2 estrogen receptor 2 [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112822311, updated on 15-Mar-2024

Summary

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Gene symbol
ESR2
Gene description
estrogen receptor 2
See related
EnsemblRapid:ENSCURG00000006124
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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See ESR2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312827.1 (35452614..35509403)

NW_020312827.1Genomic Context describing neighboring genes Neighboring gene methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 Neighboring gene coiled-coil domain-containing protein 170-like Neighboring gene 60S ribosomal protein L39 Neighboring gene 5S ribosomal RNA Neighboring gene spectrin repeat containing nuclear envelope protein 2 Neighboring gene craniofacial development protein 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020312827 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear estrogen receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to estradiol stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular estrogen receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
estrogen receptor beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020312827.1 Reference ASM326570v1 Primary Assembly

    Range
    35452614..35509403
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025869911.1 → XP_025725696.1  estrogen receptor beta isoform X1

    UniProtKB/TrEMBL
    A0A3Q7QC88
    Related
    ENSCURP00000009702.1, ENSCURT00000011408.1
    Conserved Domains (3) summary
    cd06949
    Location:282 → 517
    NR_LBD_ER; Ligand binding domain of Estrogen receptor, which are activated by the hormone 17beta-estradiol (estrogen)
    cd07171
    Location:163 → 244
    NR_DBD_ER; DNA-binding domain of estrogen receptors (ER) is composed of two C4-type zinc fingers
    pfam12497
    Location:35 → 141
    ERbeta_N; Estrogen receptor beta

  2. XM_025869912.1 → XP_025725697.1  estrogen receptor beta isoform X2

    UniProtKB/TrEMBL
    A0A3Q7P5U5
    Related
    ENSCURP00000009704.1, ENSCURT00000011411.1
    Conserved Domains (3) summary
    cd07171
    Location:163 → 244
    NR_DBD_ER; DNA-binding domain of estrogen receptors (ER) is composed of two C4-type zinc fingers
    pfam12497
    Location:35 → 141
    ERbeta_N; Estrogen receptor beta
    cl11397
    Location:282 → 426
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
Nucleotide Protein
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