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RBM22 RNA binding motif protein 22 [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112820183, updated on 15-Mar-2024

Summary

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Gene symbol
RBM22
Gene description
RNA binding motif protein 22
See related
EnsemblRapid:ENSCURG00000006385
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312816.1 (50984931..50994996)

NW_020312816.1Genomic Context describing neighboring genes Neighboring gene small integral membrane protein 3 Neighboring gene dynactin subunit 4 Neighboring gene myozenin 3 Neighboring gene synaptopodin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020312816 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U6 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pre-mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type catalytic step 1 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-splicing factor RBM22

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020312816.1 Reference ASM326570v1 Primary Assembly

    Range
    50984931..50994996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025867235.1 → XP_025723020.1  pre-mRNA-splicing factor RBM22 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7NMY5
    Related
    ENSCURP00000010073.1, ENSCURT00000011833.1
    Conserved Domains (2) summary
    smart00356
    Location:159 → 185
    ZnF_C3H1; zinc finger
    cd12224
    Location:231 → 304
    RRM_RBM22; RNA recognition motif (RRM) found in Pre-mRNA-splicing factor RBM22 and similar proteins

  2. XM_025867236.1 → XP_025723021.1  pre-mRNA-splicing factor RBM22 isoform X2

    UniProtKB/TrEMBL
    A0A3Q7Q430
    Conserved Domains (3) summary
    TIGR01628
    Location:234 → 397
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    smart00356
    Location:159 → 185
    ZnF_C3H1; zinc finger
    cd12224
    Location:231 → 304
    RRM_RBM22; RNA recognition motif (RRM) found in Pre-mRNA-splicing factor RBM22 and similar proteins
Nucleotide Protein
Heading Accession and Version

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