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ABAT 4-aminobutyrate aminotransferase [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112814618, updated on 15-Mar-2024

Summary

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Gene symbol
ABAT
Gene description
4-aminobutyrate aminotransferase
See related
EnsemblRapid:ENSCURG00000025171
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020313278.1 (675467..758571)

NW_020313278.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 114 Neighboring gene methyltransferase 22, Kin17 lysine Neighboring gene transmembrane protein 186 Neighboring gene phosphomannomutase 2 Neighboring gene calcium regulated heat stable protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020313278 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-aminobutyrate transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-aminobutyrate aminotransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020313278.1 Reference ASM326570v1 Primary Assembly

    Range
    675467..758571
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025860224.1 → XP_025716009.1  4-aminobutyrate aminotransferase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A3Q7N7Z3
    Related
    ENSCURP00000041027.1, ENSCURT00000046644.1
    Conserved Domains (1) summary
    TIGR00699
    Location:34 → 496
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type

  2. XM_025860222.1 → XP_025716007.1  4-aminobutyrate aminotransferase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A3Q7NB50
    Conserved Domains (1) summary
    cl18945
    Location:34 → 423
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

  3. XM_025860223.1 → XP_025716008.1  4-aminobutyrate aminotransferase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A3Q7NB50
    Conserved Domains (1) summary
    cl18945
    Location:34 → 423
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
Heading Accession and Version

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