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SNAPIN SNAP associated protein [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112813714, updated on 15-Mar-2024

Summary

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Gene symbol
SNAPIN
Gene description
SNAP associated protein
See related
EnsemblRapid:ENSCURG00000024326
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020313140.1 (2419665..2421497, complement)

NW_020313140.1Genomic Context describing neighboring genes Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene interleukin enhancer binding factor 2 Neighboring gene chromatin target of PRMT1 Neighboring gene S100 calcium binding protein A1 Neighboring gene S100 calcium binding protein A13

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020313140 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lysosome localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lysosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of synaptic vesicle exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BLOC-1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of BORC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SNARE-associated protein Snapin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020313140.1 Reference ASM326570v1 Primary Assembly

    Range
    2419665..2421497 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025858806.1 → XP_025714591.1  SNARE-associated protein Snapin

    UniProtKB/TrEMBL
    A0A3Q7PFI6
    Related
    ENSCURP00000039561.1, ENSCURT00000045058.1
    Conserved Domains (1) summary
    pfam14712
    Location:25 → 111
    Snapin_Pallidin; Snapin/Pallidin
Nucleotide Protein
Heading Accession and Version

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