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CPSF4L cleavage and polyadenylation specific factor 4 like [ Canis lupus dingo (dingo) ]

Gene ID: 112673010, updated on 15-Mar-2024

Summary

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Gene symbol
CPSF4L
Gene description
cleavage and polyadenylation specific factor 4 like
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 9 NC_064251.1 (7606291..7613349)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 9 Unlocalized Scaffold NW_023365136.1 (8156492..8163553)

Chromosome 9 - NC_064251.1Genomic Context describing neighboring genes Neighboring gene sidekick cell adhesion molecule 2 Neighboring gene CDC42 effector protein 4 Neighboring gene mitochondrial nucleoid associated protein 1 Neighboring gene VCP nuclear cofactor family member 1 Neighboring gene component of oligomeric golgi complex 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mRNA cleavage and polyadenylation specificity factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: putative cleavage and polyadenylation specificity factor subunit 4-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064251.1 Reference ASM325472v2

    Range
    7606291..7613349
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025468477.2 → XP_025324262.2  LOW QUALITY PROTEIN: putative cleavage and polyadenylation specificity factor subunit 4-like protein

    Conserved Domains (1) summary
    COG5084
    Location:39 → 161
    YTH1; Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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