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LNX2 ligand of numb-protein X 2 [ Canis lupus dingo (dingo) ]

Gene ID: 112669487, updated on 3-Apr-2024

Summary

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Gene symbol
LNX2
Gene description
ligand of numb-protein X 2
See related
Ensembl:ENSCAFG00020025302
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 25
Exon count:
14
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 25 NC_064267.1 (11976225..12052777)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 25 NC_049957.1 (12120704..12197486)

Chromosome 25 - NC_064267.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112669491 Neighboring gene small nucleolar RNA U3 Neighboring gene protein POLR1D-like Neighboring gene DNA-directed RNA polymerases I and III subunit RPAC2 Neighboring gene uncharacterized LOC125753585 Neighboring gene uncharacterized LOC112669490 Neighboring gene mitochondrial fission regulator 2-like Neighboring gene uncharacterized LOC125753602

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ligand of Numb protein X 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064267.1 Reference ASM325472v2

    Range
    11976225..12052777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025462632.3 → XP_025318417.1  ligand of Numb protein X 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LMU8, A0A8C0NWX0, A0A8C0T5X3, A0A8I3PQM2
    Conserved Domains (3) summary
    smart00228
    Location:230 → 316
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:598 → 682
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd16780
    Location:45 → 89
    mRING-HC-C3HC3D_LNX2; Modified RING finger, HC subclass (C3HC3D-type), found in ligand of numb protein X 2 (LNX2)

  2. XM_035717666.2 → XP_035573559.1  ligand of Numb protein X 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0T5X3, A0A8C0T724, A0A8I3S5E6
    Conserved Domains (3) summary
    smart00228
    Location:230 → 316
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:551 → 635
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd16780
    Location:45 → 89
    mRING-HC-C3HC3D_LNX2; Modified RING finger, HC subclass (C3HC3D-type), found in ligand of numb protein X 2 (LNX2)

  3. XM_049100975.1 → XP_048956932.1  ligand of Numb protein X 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LMU8, A0A8C0NWX0, A0A8I3PQM2

  4. XM_025462633.3 → XP_025318418.1  ligand of Numb protein X 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LMU8, A0A8C0NWX0, A0A8C0T5X3, A0A8I3PQM2
    Related
    ENSCAFP00020032471.1
    Conserved Domains (3) summary
    smart00228
    Location:230 → 316
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:598 → 682
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd16780
    Location:45 → 89
    mRING-HC-C3HC3D_LNX2; Modified RING finger, HC subclass (C3HC3D-type), found in ligand of numb protein X 2 (LNX2)

  5. XM_049100976.1 → XP_048956933.1  ligand of Numb protein X 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LMU8, A0A8C0NWX0, A0A8I3PQM2

  6. XM_049100977.1 → XP_048956934.1  ligand of Numb protein X 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LMU8, A0A8C0NWX0, A0A8I3PQM2

  7. XM_035717660.2 → XP_035573553.1  ligand of Numb protein X 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LMU8, A0A8C0NWX0, A0A8C0T5X3, A0A8I3PQM2
    Conserved Domains (3) summary
    smart00228
    Location:230 → 316
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:598 → 682
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd16780
    Location:45 → 89
    mRING-HC-C3HC3D_LNX2; Modified RING finger, HC subclass (C3HC3D-type), found in ligand of numb protein X 2 (LNX2)
Nucleotide Protein
Heading Accession and Version

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