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ZNF385B zinc finger protein 385B [ Canis lupus dingo (dingo) ]

Gene ID: 112668191, updated on 15-Mar-2024

Summary

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Gene symbol
ZNF385B
Gene description
zinc finger protein 385B
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See ZNF385B in Genome Data Viewer
Location:
chromosome: 36
Exon count:
27
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 36 NC_064278.1 (23098461..23480999, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 36 NC_049958.1 (23125081..23511445, complement)

Chromosome 36 - NC_064278.1Genomic Context describing neighboring genes Neighboring gene SEC14 and spectrin domain containing 1 Neighboring gene uncharacterized LOC125754421 Neighboring gene uncharacterized LOC112668196 Neighboring gene uncharacterized LOC125754422 Neighboring gene uncharacterized LOC112668194 Neighboring gene collagen alpha-1(I) chain-like Neighboring gene CWC22 spliceosome associated protein homolog Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 385B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064278.1 Reference ASM325472v2

    Range
    23098461..23480999 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025460364.3 → XP_025316149.1  zinc finger protein 385B isoform X3

    Conserved Domains (2) summary
    sd00020
    Location:198 → 260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:259 → 283
    zf-met; Zinc-finger of C2H2 type

  2. XM_049106196.1 → XP_048962153.1  zinc finger protein 385B isoform X6

  3. XM_025460357.3 → XP_025316142.1  zinc finger protein 385B isoform X7

    Conserved Domains (2) summary
    sd00020
    Location:219 → 281
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:280 → 304
    zf-met; Zinc-finger of C2H2 type

  4. XM_025460366.3 → XP_025316151.1  zinc finger protein 385B isoform X3

    Conserved Domains (2) summary
    sd00020
    Location:198 → 260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:259 → 283
    zf-met; Zinc-finger of C2H2 type

  5. XM_025460355.3 → XP_025316140.1  zinc finger protein 385B isoform X4

    Conserved Domains (2) summary
    sd00020
    Location:239 → 301
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:300 → 324
    zf-met; Zinc-finger of C2H2 type

  6. XM_025460363.3 → XP_025316148.1  zinc finger protein 385B isoform X3

    Conserved Domains (2) summary
    sd00020
    Location:198 → 260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:259 → 283
    zf-met; Zinc-finger of C2H2 type

  7. XM_025460361.3 → XP_025316146.1  zinc finger protein 385B isoform X3

    Conserved Domains (2) summary
    sd00020
    Location:198 → 260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:259 → 283
    zf-met; Zinc-finger of C2H2 type

  8. XM_025460356.3 → XP_025316141.1  zinc finger protein 385B isoform X5

    Conserved Domains (2) summary
    sd00020
    Location:233 → 295
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:294 → 318
    zf-met; Zinc-finger of C2H2 type

  9. XM_025460365.3 → XP_025316150.1  zinc finger protein 385B isoform X3

    Conserved Domains (2) summary
    sd00020
    Location:198 → 260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:259 → 283
    zf-met; Zinc-finger of C2H2 type

  10. XM_025460369.3 → XP_025316154.1  zinc finger protein 385B isoform X3

    Conserved Domains (2) summary
    sd00020
    Location:198 → 260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:259 → 283
    zf-met; Zinc-finger of C2H2 type

  11. XM_025460354.3 → XP_025316139.1  zinc finger protein 385B isoform X3

    Conserved Domains (2) summary
    sd00020
    Location:198 → 260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:259 → 283
    zf-met; Zinc-finger of C2H2 type

  12. XM_025460367.2 → XP_025316152.1  zinc finger protein 385B isoform X3

    Conserved Domains (2) summary
    sd00020
    Location:198 → 260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:259 → 283
    zf-met; Zinc-finger of C2H2 type

  13. XM_035696299.2 → XP_035552192.1  zinc finger protein 385B isoform X1

    Conserved Domains (3) summary
    smart00451
    Location:50 → 80
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:321 → 383
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:382 → 406
    zf-met; Zinc-finger of C2H2 type

  14. XM_035696302.2 → XP_035552195.1  zinc finger protein 385B isoform X1

    Conserved Domains (3) summary
    smart00451
    Location:50 → 80
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:321 → 383
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:382 → 406
    zf-met; Zinc-finger of C2H2 type

  15. XM_025460352.3 → XP_025316137.1  zinc finger protein 385B isoform X1

    Conserved Domains (3) summary
    smart00451
    Location:50 → 80
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:321 → 383
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:382 → 406
    zf-met; Zinc-finger of C2H2 type

  16. XM_025460351.3 → XP_025316136.1  zinc finger protein 385B isoform X1

    Conserved Domains (3) summary
    smart00451
    Location:50 → 80
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:321 → 383
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:382 → 406
    zf-met; Zinc-finger of C2H2 type

  17. XM_049106199.1 → XP_048962156.1  zinc finger protein 385B isoform X10

  18. XM_049106195.1 → XP_048962152.1  zinc finger protein 385B isoform X2

  19. XM_049106197.1 → XP_048962154.1  zinc finger protein 385B isoform X8

  20. XM_049106198.1 → XP_048962155.1  zinc finger protein 385B isoform X9

Nucleotide Protein
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