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CSTF3 cleavage stimulation factor subunit 3 [ Canis lupus dingo (dingo) ]

Gene ID: 112663435, updated on 15-Mar-2024

Summary

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Gene symbol
CSTF3
Gene description
cleavage stimulation factor subunit 3
See related
Ensembl:ENSCAFG00020002715
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
23
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 18 NC_064260.1 (34422668..34492642)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 18 Unlocalized Scaffold NW_023365182.1 (34876550..34946538)

Chromosome 18 - NC_064260.1Genomic Context describing neighboring genes Neighboring gene homeodomain interacting protein kinase 3 Neighboring gene uncharacterized LOC112663439 Neighboring gene uncharacterized LOC118351349 Neighboring gene t-complex 11 like 1 Neighboring gene uncharacterized LOC118351350 Neighboring gene DEP domain containing 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cleavage stimulation factor subunit 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064260.1 Reference ASM325472v2

    Range
    34422668..34492642
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025452409.3 → XP_025308194.1  cleavage stimulation factor subunit 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JRY5, A0A8C0Z207, A0A8I3PSH2
    Related
    ENSCAFP00020004211.1
    Conserved Domains (3) summary
    COG5107
    Location:14 → 515
    RNA14; Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification]
    sd00006
    Location:31 → 60
    TPR; TPR repeat [structural motif]
    pfam05843
    Location:375 → 649
    Suf; Suppressor of forked protein (Suf)

  2. XM_035701463.2 → XP_035557356.1  cleavage stimulation factor subunit 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JSR4
    Conserved Domains (2) summary
    COG5107
    Location:2 → 423
    RNA14; Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification]
    pfam05843
    Location:283 → 557
    Suf; Suppressor of forked protein (Suf)

  3. XM_025452411.3 → XP_025308196.1  cleavage stimulation factor subunit 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0JSR4
    Conserved Domains (2) summary
    COG5107
    Location:2 → 423
    RNA14; Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification]
    pfam05843
    Location:283 → 557
    Suf; Suppressor of forked protein (Suf)
Nucleotide Protein
Heading Accession and Version

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