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PGD phosphogluconate dehydrogenase [ Canis lupus dingo (dingo) ]

Gene ID: 112662585, updated on 15-Mar-2024

Summary

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Gene symbol
PGD
Gene description
phosphogluconate dehydrogenase
See related
Ensembl:ENSCAFG00020021994
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See PGD in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 2 NC_064244.1 (84101603..84116819, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 2 Unlocalized Scaffold NW_023365054.1 (85396943..85412176, complement)

Chromosome 2 - NC_064244.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene centromere protein S Neighboring gene uncharacterized LOC112662586

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphogluconate dehydrogenase (decarboxylating) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-gluconate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pentose-phosphate shunt, oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
6-phosphogluconate dehydrogenase, decarboxylating

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064244.1 Reference ASM325472v2

    Range
    84101603..84116819 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025451108.3 → XP_025306893.1  6-phosphogluconate dehydrogenase, decarboxylating

    UniProtKB/TrEMBL
    A0A8C0LC87, A0A8C0P5E9, A0A8I3MQ54
    Related
    ENSCAFP00020028031.1
    Conserved Domains (1) summary
    PRK09287
    Location:14 → 470
    PRK09287; NADP-dependent phosphogluconate dehydrogenase
Nucleotide Protein
Heading Accession and Version

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