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HDGFL3 HDGF like 3 [ Canis lupus dingo (dingo) ]

Gene ID: 112653082, updated on 15-Mar-2024

Summary

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Gene symbol
HDGFL3
Gene description
HDGF like 3
See related
Ensembl:ENSCAFG00020015896
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See HDGFL3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 3 NC_064245.1 (54958552..55039683, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 3 Unlocalized Scaffold NW_023365069.1 (55753329..55834658, complement)

Chromosome 3 - NC_064245.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118354236 Neighboring gene BTB domain containing 1 Neighboring gene small nucleolar RNA SNORD45 Neighboring gene transmembrane 6 superfamily member 1 Neighboring gene basonuclin zinc finger protein 1 Neighboring gene SH3 domain containing GRB2 like 3, endophilin A3 Neighboring gene protein Abitram-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hepatoma-derived growth factor-related protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064245.1 Reference ASM325472v2

    Range
    54958552..55039683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025436903.3 → XP_025292688.1  hepatoma-derived growth factor-related protein 3

    UniProtKB/TrEMBL
    A0A8C0Q7T4, A0A8I3MKA8
    Related
    ENSCAFP00020020019.1
    Conserved Domains (1) summary
    cd05834
    Location:7 → 91
    HDGF_related; The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF. This family of endogenous nuclear-targeted mitogens includes HRP (HDGF-related proteins 1, 2, 3, 4, or HPR1, ...
Nucleotide Protein
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