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CTNNAL1 catenin alpha like 1 [ Canis lupus dingo (dingo) ]

Gene ID: 112650013, updated on 3-Apr-2024

Summary

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Gene symbol
CTNNAL1
Gene description
catenin alpha like 1
See related
Ensembl:ENSCAFG00020021832
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
20
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 11 NC_064253.1 (63621782..63682831, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 11 Unlocalized Scaffold NW_023365147.1 (65360560..65421621, complement)

Chromosome 11 - NC_064253.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112650018 Neighboring gene elongator acetyltransferase complex subunit 1 Neighboring gene uncharacterized LOC112650019 Neighboring gene actin binding transcription modulator Neighboring gene uncharacterized LOC112650514 Neighboring gene transmembrane protein 245 Neighboring gene uncharacterized LOC125756079 Neighboring gene uncharacterized LOC112650515

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-catulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064253.1 Reference ASM325472v2

    Range
    63621782..63682831 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049116362.1 → XP_048972319.1  alpha-catulin isoform X3

  2. XM_025432632.3 → XP_025288417.1  alpha-catulin isoform X2

    UniProtKB/TrEMBL
    A0A8C0RKG9
    Conserved Domains (1) summary
    pfam01044
    Location:86 → 519
    Vinculin; Vinculin family

  3. XM_025432631.3 → XP_025288416.1  alpha-catulin isoform X1

    UniProtKB/TrEMBL
    A0A8C0LBP5, A0A8C0RKG9
    Related
    ENSCAFP00020027804.1
    Conserved Domains (1) summary
    pfam01044
    Location:86 → 669
    Vinculin; Vinculin family

  4. XM_025432634.3 → XP_025288419.1  alpha-catulin isoform X4

    UniProtKB/TrEMBL
    A0A8C0RKG9
    Conserved Domains (1) summary
    pfam01044
    Location:56 → 639
    Vinculin; Vinculin family
Nucleotide Protein
Heading Accession and Version

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