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CHM CHM Rab escort protein [ Canis lupus dingo (dingo) ]

Gene ID: 112649483, updated on 15-Mar-2024

Summary

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Gene symbol
CHM
Gene description
CHM Rab escort protein
See related
Ensembl:ENSCAFG00020008573
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See CHM in Genome Data Viewer
Location:
chromosome: X
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) X NC_064281.1 (66710729..66954950, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) X Unlocalized Scaffold NW_023365275.1 (67223945..67468179, complement)

Chromosome X - NC_064281.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 711 Neighboring gene POF1B actin binding protein Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like Neighboring gene protein C-ets-1-like Neighboring gene 40S ribosomal protein S8-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-dissociation inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein geranylgeranylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Rab-protein geranylgeranyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rab proteins geranylgeranyltransferase component A 1
Names
CHM, Rab escort protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064281.1 Reference ASM325472v2

    Range
    66710729..66954950 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035711636.1 → XP_035567529.1  rab proteins geranylgeranyltransferase component A 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0S8V5, A0A8I3PPC3
    Conserved Domains (3) summary
    COG0644
    Location:8 → 132
    FixC; Dehydrogenase (flavoprotein) [Energy production and conversion]
    cl21454
    Location:224 → 503
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    cl27287
    Location:9 → 46
    Glf; UDP-galactopyranose mutase [Cell wall/membrane/envelope biogenesis]

  2. XM_035711637.1 → XP_035567530.1  rab proteins geranylgeranyltransferase component A 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0S8W8, A0A8I3PJK3
    Conserved Domains (3) summary
    COG0644
    Location:8 → 132
    FixC; Dehydrogenase (flavoprotein) [Energy production and conversion]
    cl21454
    Location:224 → 500
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    cl27287
    Location:9 → 46
    Glf; UDP-galactopyranose mutase [Cell wall/membrane/envelope biogenesis]

  3. XM_025431816.2 → XP_025287601.1  rab proteins geranylgeranyltransferase component A 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0S8V5, A0A8C0S945, A0A8I3PPC3, A0A8I3PS30
    Conserved Domains (3) summary
    COG0644
    Location:8 → 132
    FixC; Dehydrogenase (flavoprotein) [Energy production and conversion]
    cl21454
    Location:224 → 526
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    cl27287
    Location:9 → 46
    Glf; UDP-galactopyranose mutase [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version

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