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PABPC5 poly(A) binding protein cytoplasmic 5 [ Canis lupus dingo (dingo) ]

Gene ID: 112649473, updated on 15-Mar-2024

Summary

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Gene symbol
PABPC5
Gene description
poly(A) binding protein cytoplasmic 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) X NC_064281.1 (68571948..68592583)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) X Unlocalized Scaffold NW_023365275.1 (69085676..69105936)

Chromosome X - NC_064281.1Genomic Context describing neighboring genes Neighboring gene TGFB induced factor homeobox 2 like X-linked Neighboring gene U6 spliceosomal RNA Neighboring gene protocadherin 11 X-linked Neighboring gene importin subunit alpha-1-like Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyadenylate-binding protein 5
Names
profilin-1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064281.1 Reference ASM325472v2

    Range
    68571948..68592583
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025431802.3 → XP_025287587.1  polyadenylate-binding protein 5

    UniProtKB/TrEMBL
    A0A8I3Q8G5, A0A8P0TV31
    Conserved Domains (1) summary
    TIGR01628
    Location:22 → 379
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family

  2. XM_025431801.3 → XP_025287586.1  polyadenylate-binding protein 5

    UniProtKB/TrEMBL
    A0A8I3Q8G5, A0A8P0TV31
    Conserved Domains (1) summary
    TIGR01628
    Location:22 → 379
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family

RNA

  1. XR_003129591.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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