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DHX38 DEAH-box helicase 38 [ Canis lupus dingo (dingo) ]

Gene ID: 112646586, updated on 3-Apr-2024

Summary

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Gene symbol
DHX38
Gene description
DEAH-box helicase 38
See related
Ensembl:ENSCAFG00020020392
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
28
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 5 NC_064247.1 (77964547..77983548)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 5 Unlocalized Scaffold NW_023365093.1 (78264678..78283763)

Chromosome 5 - NC_064247.1Genomic Context describing neighboring genes Neighboring gene dihydroorotate dehydrogenase (quinone) Neighboring gene thioredoxin like 4B Neighboring gene 60S ribosomal protein L13a-like Neighboring gene haptoglobin Neighboring gene polyamine modulated factor 1 binding protein 1 Neighboring gene NPC intracellular cholesterol transporter 2 Neighboring gene uncharacterized LOC112646585

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064247.1 Reference ASM325472v2

    Range
    77964547..77983548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035716215.2 → XP_035572108.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

    UniProtKB/TrEMBL
    A0A8C0L8B5
    Conserved Domains (1) summary
    COG1643
    Location:514 → 1145
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  2. XM_035716214.2 → XP_035572107.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

    UniProtKB/TrEMBL
    A0A8C0L8B5
    Conserved Domains (1) summary
    COG1643
    Location:514 → 1145
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

  3. XM_049110720.1 → XP_048966677.1  pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

Nucleotide Protein
Heading Accession and Version

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