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UBQLN2 ubiquilin 2 [ Theropithecus gelada (gelada) ]

Gene ID: 112616239, updated on 15-Mar-2024

Summary

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Gene symbol
UBQLN2
Gene description
ubiquilin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Theropithecus gelada
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Theropithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Tgel_1.0 (GCF_003255815.1) X NC_037689.1 (2764535..2768973, complement)

Chromosome X - NC_037689.1Genomic Context describing neighboring genes Neighboring gene spindlin family member 3 Neighboring gene negative regulator of P-body association Neighboring gene cytochrome b-c1 complex subunit 7 pseudogene Neighboring gene selenide, water dikinase 1 pseudogene Neighboring gene transcriptional coactivator YAP1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037689.1 Chromosome X Reference Tgel_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquilin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Theropithecus gelada Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tgel_1.0 Primary Assembly

Genomic

  1. NC_037689.1 Reference Tgel_1.0 Primary Assembly

    Range
    2764535..2768973 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025373237.1 → XP_025229022.1  ubiquilin-2 isoform X2

    Conserved Domains (3) summary
    smart00727
    Location:182 → 215
    STI1; Heat shock chaperonin-binding motif
    cd01808
    Location:33 → 103
    hPLIC_N; Ubiquitin-like domain of hPLIC-1 and hPLIC2
    cd14399
    Location:521 → 560
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins

  2. XM_025373238.1 → XP_025229023.1  ubiquilin-2 isoform X3

    Conserved Domains (3) summary
    smart00727
    Location:382 → 426
    STI1; Heat shock chaperonin-binding motif
    cd01808
    Location:33 → 103
    hPLIC_N; Ubiquitin-like domain of hPLIC-1 and hPLIC2
    cd14399
    Location:469 → 508
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins

  3. XM_025373236.1 → XP_025229021.1  ubiquilin-2 isoform X1

    Conserved Domains (3) summary
    smart00727
    Location:382 → 426
    STI1; Heat shock chaperonin-binding motif
    cd01808
    Location:33 → 103
    hPLIC_N; Ubiquitin-like domain of hPLIC-1 and hPLIC2
    cd14399
    Location:549 → 588
    UBA_PLICs; UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins
Nucleotide Protein
Heading Accession and Version

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