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ZNF48 zinc finger protein 48 [ Theropithecus gelada (gelada) ]

Gene ID: 112614004, updated on 15-Mar-2024

Summary

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Gene symbol
ZNF48
Gene description
zinc finger protein 48
Gene type
protein coding
RefSeq status
MODEL
Organism
Theropithecus gelada
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Theropithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Tgel_1.0 (GCF_003255815.1) 20 NC_037688.1 (54922342..54942132, complement)

Chromosome 20 - NC_037688.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA42/SNORA80 family Neighboring gene zinc finger protein 771 Neighboring gene septin 1 Neighboring gene myosin light chain 11 Neighboring gene TBC1 domain family member 10B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037688.1 Chromosome 20 Reference Tgel_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: zinc finger protein 48

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Theropithecus gelada Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tgel_1.0 Primary Assembly

Genomic

  1. NC_037688.1 Reference Tgel_1.0 Primary Assembly

    Range
    54922342..54942132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025370043.1 → XP_025225828.1  LOW QUALITY PROTEIN: zinc finger protein 48

    UniProtKB/TrEMBL
    A0A8D2F391
    Conserved Domains (5) summary
    COG5048
    Location:191 → 600
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:115 → 135
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:574 → 594
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:114 → 135
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:127 → 150
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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