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SYNRG synergin gamma [ Theropithecus gelada (gelada) ]

Gene ID: 112608986, updated on 15-Mar-2024

Summary

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Gene symbol
SYNRG
Gene description
synergin gamma
See related
Ensembl:ENSTGEG00000017826
Gene type
protein coding
RefSeq status
MODEL
Organism
Theropithecus gelada
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Theropithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
23
Annotation release Status Assembly Chr Location
100 current Tgel_1.0 (GCF_003255815.1) 16 NC_037684.1 (10409386..10502763)

Chromosome 16 - NC_037684.1Genomic Context describing neighboring genes Neighboring gene HNF1 homeobox B Neighboring gene DExD-box helicase 52 Neighboring gene dual specificity phosphatase 14 Neighboring gene 60S ribosomal protein L36a-like Neighboring gene transcriptional adaptor 2A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037684.1 Chromosome 16 Reference Tgel_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of clathrin coat of trans-Golgi network vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synergin gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Theropithecus gelada Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tgel_1.0 Primary Assembly

Genomic

  1. NC_037684.1 Reference Tgel_1.0 Primary Assembly

    Range
    10409386..10502763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025361203.1 → XP_025216988.1  synergin gamma isoform X1

    UniProtKB/TrEMBL
    A0A8D2FJU6
    Related
    ENSTGEP00000022098.1, ENSTGET00000026367.1
    Conserved Domains (2) summary
    cd00052
    Location:417 → 468
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    pfam09606
    Location:32 → 270
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  2. XM_025361204.1 → XP_025216989.1  synergin gamma isoform X2

    UniProtKB/TrEMBL
    A0A8D2FKQ3, A0A8D2K3Q5
    Related
    ENSTGEP00000022075.1, ENSTGET00000026337.1
    Conserved Domains (4) summary
    cd00052
    Location:316 → 367
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    pfam02029
    Location:116 → 203
    Caldesmon
    pfam09606
    Location:32 → 131
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cl25549
    Location:116 → 149
    ARGLU; Arginine and glutamate-rich 1

  3. XM_025361205.1 → XP_025216990.1  synergin gamma isoform X3

    UniProtKB/TrEMBL
    A0A8D2FKQ3
    Conserved Domains (3) summary
    cd00052
    Location:238 → 289
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    pfam09606
    Location:32 → 131
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cl25549
    Location:116 → 149
    ARGLU; Arginine and glutamate-rich 1

  4. XM_025361207.1 → XP_025216992.1  synergin gamma isoform X5

    UniProtKB/TrEMBL
    A0A8D2FKQ3
    Conserved Domains (3) summary
    cd00052
    Location:238 → 289
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    pfam09606
    Location:32 → 131
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cl25549
    Location:116 → 149
    ARGLU; Arginine and glutamate-rich 1

  5. XM_025361208.1 → XP_025216993.1  synergin gamma isoform X6

    UniProtKB/TrEMBL
    A0A8D2FKQ3, A0A8D2FKR0
    Related
    ENSTGEP00000022080.1, ENSTGET00000026343.1
    Conserved Domains (3) summary
    cd00052
    Location:238 → 288
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    pfam09606
    Location:32 → 211
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cl25549
    Location:116 → 149
    ARGLU; Arginine and glutamate-rich 1

  6. XM_025361206.1 → XP_025216991.1  synergin gamma isoform X4

    UniProtKB/TrEMBL
    A0A8D2FKQ3
    Conserved Domains (3) summary
    cd00052
    Location:237 → 288
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    pfam09606
    Location:32 → 337
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
    cl25549
    Location:115 → 148
    ARGLU; Arginine and glutamate-rich 1
Nucleotide Protein
Heading Accession and Version

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