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AP1B1 adaptor related protein complex 1 subunit beta 1 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112415150, updated on 15-Mar-2024

Summary

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Gene symbol
AP1B1
Gene description
adaptor related protein complex 1 subunit beta 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020175443.1 (554523..606227, complement)

NW_020175443.1Genomic Context describing neighboring genes Neighboring gene growth arrest specific 2 like 1 Neighboring gene RAS like family 10 member A Neighboring gene small nucleolar RNA SNORD125 Neighboring gene neurofilament heavy chain Neighboring gene THO complex subunit 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020175443 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of clathrin adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-1 complex subunit beta-1
Names
adaptor related protein complex 1 beta 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020175443.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    554523..606227 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024767992.1 → XP_024623760.1  AP-1 complex subunit beta-1 isoform X2

    UniProtKB/TrEMBL
    A0A341DAH9
    Conserved Domains (4) summary
    smart00809
    Location:719 → 819
    Alpha_adaptinC2; Adaptin C-terminal domain
    smart01020
    Location:828 → 938
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    sd00044
    Location:51 → 75
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:11 → 534
    Adaptin_N; Adaptin N terminal region

  2. XM_024767991.1 → XP_024623759.1  AP-1 complex subunit beta-1 isoform X1

    UniProtKB/TrEMBL
    A0A341DA57
    Conserved Domains (4) summary
    smart00809
    Location:719 → 819
    Alpha_adaptinC2; Adaptin C-terminal domain
    smart01020
    Location:828 → 941
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    sd00044
    Location:51 → 75
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:11 → 534
    Adaptin_N; Adaptin N terminal region
Nucleotide Protein
Heading Accession and Version

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