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NR3C1 nuclear receptor subfamily 3 group C member 1 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112404348, updated on 15-Mar-2024

Summary

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Gene symbol
NR3C1
Gene description
nuclear receptor subfamily 3 group C member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020173922.1 (7879250..8005849, complement)

NW_020173922.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112404335 Neighboring gene Rho GTPase activating protein 26 Neighboring gene chromobox protein homolog 3 pseudogene Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020173922 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear glucocorticoid receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucocorticoid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucocorticoid receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucocorticoid receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020173922.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    7879250..8005849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024752244.1 → XP_024608012.1  glucocorticoid receptor isoform X1

    UniProtKB/TrEMBL
    A0A341C114
    Conserved Domains (3) summary
    cd07076
    Location:536 → 782
    NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily
    cd07172
    Location:421 → 499
    NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers
    pfam02155
    Location:27 → 406
    GCR; Glucocorticoid receptor

  2. XM_024752243.1 → XP_024608011.1  glucocorticoid receptor isoform X1

    UniProtKB/TrEMBL
    A0A341C114
    Conserved Domains (3) summary
    cd07076
    Location:536 → 782
    NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily
    cd07172
    Location:421 → 499
    NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers
    pfam02155
    Location:27 → 406
    GCR; Glucocorticoid receptor

  3. XM_024752248.1 → XP_024608016.1  glucocorticoid receptor isoform X2

    UniProtKB/TrEMBL
    A0A341BZI5
    Conserved Domains (3) summary
    cd07076
    Location:535 → 781
    NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily
    cd07172
    Location:421 → 498
    NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers
    pfam02155
    Location:27 → 406
    GCR; Glucocorticoid receptor

  4. XM_024752245.1 → XP_024608013.1  glucocorticoid receptor isoform X1

    UniProtKB/TrEMBL
    A0A341C114
    Conserved Domains (3) summary
    cd07076
    Location:536 → 782
    NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily
    cd07172
    Location:421 → 499
    NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers
    pfam02155
    Location:27 → 406
    GCR; Glucocorticoid receptor

  5. XM_024752247.1 → XP_024608015.1  glucocorticoid receptor isoform X1

    UniProtKB/TrEMBL
    A0A341C114
    Conserved Domains (3) summary
    cd07076
    Location:536 → 782
    NR_LBD_GR; Ligand binding domain of the glucocorticoid receptor, a member of the nuclear receptor superfamily
    cd07172
    Location:421 → 499
    NR_DBD_GR_PR; DNA-binding domain of glucocorticoid receptor (GR) is composed of two C4-type zinc fingers
    pfam02155
    Location:27 → 406
    GCR; Glucocorticoid receptor
Nucleotide Protein
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