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ARMC8 armadillo repeat containing 8 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112403336, updated on 15-Mar-2024

Summary

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Gene symbol
ARMC8
Gene description
armadillo repeat containing 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020173725.1 (255956..361173)

NW_020173725.1Genomic Context describing neighboring genes Neighboring gene alpha-1,4-N-acetylglucosaminyltransferase Neighboring gene debranching RNA lariats 1 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene NME/NM23 family member 9 Neighboring gene muscle RAS oncogene homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020173725 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
armadillo repeat-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020173725.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    255956..361173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024750754.1 → XP_024606522.1  armadillo repeat-containing protein 8 isoform X3

    UniProtKB/TrEMBL
    A0A341BXV2
    Conserved Domains (4) summary
    COG5064
    Location:49 → 212
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    COG5369
    Location:374 → 607
    COG5369; Uncharacterized conserved protein [Function unknown]
    sd00044
    Location:553 → 583
    HEAT; HEAT repeat [structural motif]
    sd00043
    Location:57 → 90
    ARM; armadillo repeat [structural motif]

  2. XM_024750756.1 → XP_024606524.1  armadillo repeat-containing protein 8 isoform X5

    UniProtKB/TrEMBL
    A0A341BWE6
    Conserved Domains (4) summary
    COG5064
    Location:28 → 414
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    COG5369
    Location:307 → 540
    COG5369; Uncharacterized conserved protein [Function unknown]
    sd00044
    Location:486 → 516
    HEAT; HEAT repeat [structural motif]
    sd00043
    Location:57 → 90
    ARM; armadillo repeat [structural motif]

  3. XM_024750752.1 → XP_024606520.1  armadillo repeat-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A341BUW8
    Conserved Domains (4) summary
    COG5064
    Location:49 → 212
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    COG5369
    Location:374 → 607
    COG5369; Uncharacterized conserved protein [Function unknown]
    sd00044
    Location:553 → 583
    HEAT; HEAT repeat [structural motif]
    sd00043
    Location:57 → 90
    ARM; armadillo repeat [structural motif]

  4. XM_024750753.1 → XP_024606521.1  armadillo repeat-containing protein 8 isoform X2

    UniProtKB/TrEMBL
    A0A341BV38
    Conserved Domains (4) summary
    COG5064
    Location:22 → 181
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    COG5369
    Location:343 → 576
    COG5369; Uncharacterized conserved protein [Function unknown]
    sd00044
    Location:522 → 552
    HEAT; HEAT repeat [structural motif]
    sd00043
    Location:57 → 90
    ARM; armadillo repeat [structural motif]

  5. XM_024750755.1 → XP_024606523.1  armadillo repeat-containing protein 8 isoform X4

    UniProtKB/TrEMBL
    A0A341BX27
    Conserved Domains (4) summary
    COG5064
    Location:7 → 170
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    COG5369
    Location:332 → 565
    COG5369; Uncharacterized conserved protein [Function unknown]
    sd00044
    Location:511 → 541
    HEAT; HEAT repeat [structural motif]
    sd00043
    Location:15 → 48
    ARM; armadillo repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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