U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AGMAT agmatinase (putative) [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112402818, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
AGMAT
Gene description
agmatinase (putative)
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AGMAT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020173679.1 (4083511..4108697)

NW_020173679.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene regulator of solute carriers 1 Neighboring gene DNA damage inducible 1 homolog 2 Neighboring gene DnaJ heat shock protein family (Hsp40) member C16 Neighboring gene caspase 9

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020173679 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables agmatinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in putrescine biosynthetic process from arginine, using agmatinase IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
agmatinase, mitochondrial
Names
agmatinase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020173679.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    4083511..4108697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024749992.1 → XP_024605760.1  agmatinase, mitochondrial

    UniProtKB/TrEMBL
    A0A341BSQ1
    Conserved Domains (1) summary
    cd11592
    Location:198 → 486
    Agmatinase_PAH; Agmatinase-like family includes proclavaminic acid amidinohydrolase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.