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ATG4A autophagy related 4A cysteine peptidase [ Desmodus rotundus (common vampire bat) ]

Gene ID: 112296842, updated on 30-Mar-2024

Summary

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Gene symbol
ATG4A
Gene description
autophagy related 4A cysteine peptidase
Gene type
protein coding
RefSeq status
MODEL
Organism
Desmodus rotundus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Desmodontinae; Desmodus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current HLdesRot8A (GCF_022682495.1) X NC_071400.1 (46100580..46166293)
101 previous assembly ASM294091v2 (GCF_002940915.1) Unplaced Scaffold NW_020090627.1 (5114372..5176371)

Chromosome X - NC_071400.1Genomic Context describing neighboring genes Neighboring gene non-histone chromosomal protein HMG-14-like Neighboring gene V-set and immunoglobulin domain containing 1 Neighboring gene proteasome 26S subunit, non-ATPase 10 Neighboring gene collagen type IV alpha 6 chain Neighboring gene calponin-2-like Neighboring gene kynurenine/alpha-aminoadipate aminotransferase, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-phosphatidylethanolamide deconjugating activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine protease ATG4A
Names
Putative cysteine protease required for autophagy

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022682495.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HLdesRot8A Primary Assembly

Genomic

  1. NC_071400.1 Reference HLdesRot8A Primary Assembly

    Range
    46100580..46166293
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053917040.1 → XP_053773015.1  cysteine protease ATG4A isoform X5

  2. XM_045188501.2 → XP_045044436.2  cysteine protease ATG4A isoform X3

  3. XM_024551609.3 → XP_024407377.2  cysteine protease ATG4A isoform X2

  4. XM_045188502.2 → XP_045044437.2  cysteine protease ATG4A isoform X4

  5. XM_024551608.3 → XP_024407376.2  cysteine protease ATG4A isoform X1

  6. XM_053917041.1 → XP_053773016.1  cysteine protease ATG4A isoform X5

Nucleotide Protein
Heading Accession and Version

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