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foxn3 forkhead box N3 [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112261482, updated on 15-Mar-2024

Summary

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Gene symbol
foxn3
Gene description
forkhead box N3
See related
EnsemblRapid:ENSOTSG00005019323
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG11
Exon count:
11
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG11 NC_056439.1 (15762077..15879193, complement)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 11 NC_037107.1 (14954025..15031602, complement)

Linkage Group LG11 - NC_056439.1Genomic Context describing neighboring genes Neighboring gene type II iodothyronine deiodinase-like Neighboring gene stonin 2 Neighboring gene EF-hand calcium binding domain 11 Neighboring gene tyrosyl-DNA phosphodiesterase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein N3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056439.1 Reference Otsh_v2.0 Primary Assembly

    Range
    15762077..15879193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042329819.1 → XP_042185753.1  forkhead box protein N3 isoform X2

    UniProtKB/TrEMBL
    A0A8C8FW18
    Related
    ENSOTSP00005040443.1, ENSOTST00005044004.2
    Conserved Domains (1) summary
    cd20059
    Location:142 → 231
    FH_FOXN3; Forkhead (FH) domain found in Forkhead box protein N3 (FOXN3)

  2. XM_042329815.1 → XP_042185749.1  forkhead box protein N3 isoform X1

    UniProtKB/TrEMBL
    A0A8C8FXS3
    Related
    ENSOTSP00005040442.1, ENSOTST00005044003.2
    Conserved Domains (1) summary
    cd20059
    Location:142 → 231
    FH_FOXN3; Forkhead (FH) domain found in Forkhead box protein N3 (FOXN3)

  3. XM_042329818.1 → XP_042185752.1  forkhead box protein N3 isoform X1

    UniProtKB/TrEMBL
    A0A8C8FXS3
    Conserved Domains (1) summary
    cd20059
    Location:142 → 231
    FH_FOXN3; Forkhead (FH) domain found in Forkhead box protein N3 (FOXN3)

  4. XM_042329817.1 → XP_042185751.1  forkhead box protein N3 isoform X1

    UniProtKB/TrEMBL
    A0A8C8FXS3
    Conserved Domains (1) summary
    cd20059
    Location:142 → 231
    FH_FOXN3; Forkhead (FH) domain found in Forkhead box protein N3 (FOXN3)

  5. XM_024436846.2 → XP_024292614.1  forkhead box protein N3 isoform X1

    UniProtKB/TrEMBL
    A0A8C8FXS3
    Conserved Domains (1) summary
    cd20059
    Location:142 → 231
    FH_FOXN3; Forkhead (FH) domain found in Forkhead box protein N3 (FOXN3)

  6. XM_024436847.2 → XP_024292615.1  forkhead box protein N3 isoform X1

    UniProtKB/TrEMBL
    A0A8C8FXS3
    Conserved Domains (1) summary
    cd20059
    Location:142 → 231
    FH_FOXN3; Forkhead (FH) domain found in Forkhead box protein N3 (FOXN3)
Nucleotide Protein
Heading Accession and Version

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