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LOC112258296 RING finger protein 145 [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112258296, updated on 7-Dec-2023

Summary

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Gene symbol
LOC112258296
Gene description
RING finger protein 145
See related
EnsemblRapid:ENSOTSG00005005977
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
rnf145
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Genomic context

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Location:
chromosome: LG09
Exon count:
11
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG09 NC_056437.1 (55431662..55458220, complement)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 9 NC_037105.1 (64661278..64687704, complement)

Linkage Group LG09 - NC_056437.1Genomic Context describing neighboring genes Neighboring gene clathrin interactor 1 Neighboring gene transcription factor COE1-A Neighboring gene ubiquitin-like domain-containing CTD phosphatase 1 Neighboring gene interleukin 12B, b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger protein 145

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056437.1 Reference Otsh_v2.0 Primary Assembly

    Range
    55431662..55458220 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024432576.2 → XP_024288344.1  RING finger protein 145

    UniProtKB/TrEMBL
    A0A8C8CPU6, A0A8C8ELM4
    Related
    ENSOTSP00005011482.1, ENSOTST00005012630.2
    Conserved Domains (3) summary
    pfam13705
    Location:8 → 506
    TRC8_N; TRC8 N-terminal domain
    cl17238
    Location:533 → 575
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    cl28410
    Location:537 → 671
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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