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vsir V-set immunoregulatory receptor [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112252735, updated on 15-Mar-2024

Summary

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Gene symbol
vsir
Gene description
V-set immunoregulatory receptor
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG06
Exon count:
7
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG06 NC_056434.1 (55648114..55667316)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 6 NC_037102.1 (47919680..47938837)

Linkage Group LG06 - NC_056434.1Genomic Context describing neighboring genes Neighboring gene cadherin-23-like Neighboring gene eukaryotic translation initiation factor 3, subunit 6 interacting protein Neighboring gene cadherin-23 Neighboring gene cadherin-23-like Neighboring gene cadherin-23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of CD4-positive, alpha-beta T cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of regulatory T cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type immunoglobulin domain-containing suppressor of T-cell activation

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056434.1 Reference Otsh_v2.0 Primary Assembly

    Range
    55648114..55667316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024424245.2 → XP_024280013.1  V-type immunoglobulin domain-containing suppressor of T-cell activation

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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