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rundc3b RUN domain containing 3b [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112225519, updated on 15-Mar-2024

Summary

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Gene symbol
rundc3b
Gene description
RUN domain containing 3b
See related
EnsemblRapid:ENSOTSG00005015804
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG03
Exon count:
10
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG03 NC_056431.1 (699313..716018)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 3 NC_037099.1 (2548183..2565049, complement)

Linkage Group LG03 - NC_056431.1Genomic Context describing neighboring genes Neighboring gene peroxisomal carnitine O-octanoyltransferase Neighboring gene ATP-dependent translocase ABCB1 Neighboring gene solute carrier family 25 member 40-like Neighboring gene protein DBF4 homolog A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
RUN domain-containing protein 3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056431.1 Reference Otsh_v2.0 Primary Assembly

    Range
    699313..716018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024389553.2 → XP_024245321.2  RUN domain-containing protein 3B isoform X2

    UniProtKB/TrEMBL
    A0A8C8FBM9
    Conserved Domains (1) summary
    smart00593
    Location:116 → 178
    RUN; domain involved in Ras-like GTPase signaling

  2. XM_024389545.2 → XP_024245313.2  RUN domain-containing protein 3B isoform X1

    UniProtKB/TrEMBL
    A0A8C8FF72
    Related
    ENSOTSP00005033687.2, ENSOTST00005036547.2
    Conserved Domains (1) summary
    smart00593
    Location:116 → 178
    RUN; domain involved in Ras-like GTPase signaling
Nucleotide Protein
Heading Accession and Version

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