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chrnb1 cholinergic receptor, nicotinic, beta 1 (muscle) [ Oncorhynchus tshawytscha (Chinook salmon) ]

Gene ID: 112214660, updated on 15-Mar-2024

Summary

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Gene symbol
chrnb1
Gene description
cholinergic receptor, nicotinic, beta 1 (muscle)
See related
EnsemblRapid:ENSOTSG00005014158
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus tshawytscha
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG15
Exon count:
11
Annotation release Status Assembly LG Location
101 current Otsh_v2.0 (GCF_018296145.1) LG15 NC_056443.1 (20374379..20403008)
100 previous assembly Otsh_v1.0 (GCF_002872995.1) Chromosome 15 NC_037111.1 (26241749..26270477)

Linkage Group LG15 - NC_056443.1Genomic Context describing neighboring genes Neighboring gene F-box/WD repeat-containing protein 7-like Neighboring gene fibroblast growth factor 14-like Neighboring gene claudin-7-A Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene uncharacterized LOC112214663

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit beta
Names
cholinergic receptor nicotinic beta 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus tshawytscha Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otsh_v2.0 Primary Assembly

Genomic

  1. NC_056443.1 Reference Otsh_v2.0 Primary Assembly

    Range
    20374379..20403008
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042298272.1 → XP_042154206.1  acetylcholine receptor subunit beta

    UniProtKB/TrEMBL
    A0A8C8F5Z5
    Related
    ENSOTSP00005030174.2, ENSOTST00005032631.2
    Conserved Domains (3) summary
    TIGR00860
    Location:23 → 480
    LIC; Cation transporter family protein
    cd03558
    Location:150 → 164
    LGIC_ECD; Cys-loop [structural motif]
    cl28912
    Location:26 → 236
    LGIC_ECD; extracellular domain (ECD) of Cys-loop neurotransmitter-gated ion channels (also known as ligand-gated ion channel (LGIC))
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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