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golga4 golgin A4 [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112161423, updated on 15-Mar-2024

Summary

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Gene symbol
golga4
Gene description
golgin A4
See related
Ensembl:ENSOMEG00000001329
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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See golga4 in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
25
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG15 NC_050526.1 (25535388..25559171)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096100.1 (24648879..24672637)

Linkage Group LG15 - NC_050526.1Genomic Context describing neighboring genes Neighboring gene F-box protein 11a Neighboring gene mutS homolog 6 (E. coli) Neighboring gene potassium channel, subfamily K, member 12 Neighboring gene integrin, alpha 9 Neighboring gene uncharacterized LOC112161886 Neighboring gene zinc finger CCCH domain-containing protein 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi vesicle transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
golgin subfamily A member 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050526.1 Reference ASM292280v2 Primary Assembly

    Range
    25535388..25559171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036215556.1 → XP_036071449.1  golgin subfamily A member 4 isoform X3

    UniProtKB/TrEMBL
    A0A3B3B5L1
    Conserved Domains (1) summary
    TIGR02168
    Location:751 → 1596
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. XM_024296508.2 → XP_024152276.1  golgin subfamily A member 4 isoform X1

    UniProtKB/TrEMBL
    A0A3B3B5L1, A0A3B3CWM0
    Related
    ENSOMEP00000022006.1
    Conserved Domains (2) summary
    cl03225
    Location:2011 → 2053
    GRIP; GRIP domain
    cl25732
    Location:751 → 1654
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_024296509.2 → XP_024152277.1  golgin subfamily A member 4 isoform X2

    UniProtKB/TrEMBL
    A0A3B3B5L1
    Related
    ENSOMEP00000000414.1
    Conserved Domains (2) summary
    cl03225
    Location:2010 → 2052
    GRIP; GRIP domain
    cl25732
    Location:750 → 1653
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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