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gps2 G protein pathway suppressor 2 [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112156500, updated on 15-Mar-2024

Summary

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Gene symbol
gps2
Gene description
G protein pathway suppressor 2
See related
Ensembl:ENSOMEG00000010385
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG18
Exon count:
12
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG18 NC_050529.1 (13981953..13987114)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096092.1 (11526242..11531404, complement)

Linkage Group LG18 - NC_050529.1Genomic Context describing neighboring genes Neighboring gene CTD nuclear envelope phosphatase 1a Neighboring gene GABA(A) receptor-associated protein a Neighboring gene eukaryotic translation initiation factor 5A-1 Neighboring gene Y-box-binding protein 2-B Neighboring gene solute carrier family 2, facilitated glucose transporter member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G protein pathway suppressor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050529.1 Reference ASM292280v2 Primary Assembly

    Range
    13981953..13987114
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024288808.2 → XP_024144576.1  G protein pathway suppressor 2

    UniProtKB/TrEMBL
    A0A3B3DCX5, A0A834BM27
    Related
    ENSOMEP00000027736.1
    Conserved Domains (1) summary
    pfam15991
    Location:5 → 295
    G_path_suppress; G-protein pathway suppressor

  2. XM_024288807.2 → XP_024144575.1  G protein pathway suppressor 2

    UniProtKB/TrEMBL
    A0A3B3DCX5, A0A834BM27
    Conserved Domains (1) summary
    pfam15991
    Location:5 → 295
    G_path_suppress; G-protein pathway suppressor

  3. XM_036216693.1 → XP_036072586.1  G protein pathway suppressor 2

    UniProtKB/TrEMBL
    A0A3B3DCX5, A0A834BM27
    Conserved Domains (1) summary
    pfam15991
    Location:5 → 295
    G_path_suppress; G-protein pathway suppressor
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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