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rasl11a RAS-like, family 11, member A [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112155982, updated on 15-Mar-2024

Summary

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Gene symbol
rasl11a
Gene description
RAS-like, family 11, member A
See related
Ensembl:ENSOMEG00000019923
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG18
Exon count:
7
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG18 NC_050529.1 (19852065..19861729, complement)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096092.1 (5653041..5661291)

Linkage Group LG18 - NC_050529.1Genomic Context describing neighboring genes Neighboring gene insulin receptor substrate 2-B Neighboring gene guanylyl cyclase 2 Neighboring gene uncharacterized LOC112155984 Neighboring gene ubiquitin specific peptidase 12b Neighboring gene Rho GTPase activating protein 36

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-like protein family member 11A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050529.1 Reference ASM292280v2 Primary Assembly

    Range
    19852065..19861729 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036216659.1 → XP_036072552.1  ras-like protein family member 11A-like isoform X2

    UniProtKB/TrEMBL
    A0A3B3DWM6
    Conserved Domains (1) summary
    cl38936
    Location:37 → 144
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_036216658.1 → XP_036072551.1  ras-like protein family member 11A-like isoform X1

    UniProtKB/TrEMBL
    A0A3B3CK53
    Conserved Domains (1) summary
    cd04146
    Location:37 → 240
    RERG_RasL11_like; Ras-related and Estrogen-Regulated Growth inhibitor (RERG) and Ras-like 11 (RasL11)-like families

  3. XM_036216661.1 → XP_036072554.1  ras-like protein family member 11A-like isoform X4

    UniProtKB/TrEMBL
    A0A3B3DWM6
    Conserved Domains (1) summary
    cl38936
    Location:37 → 111
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  4. XM_036216660.1 → XP_036072553.1  ras-like protein family member 11A-like isoform X3

    UniProtKB/TrEMBL
    A0A3B3DWM2
    Conserved Domains (1) summary
    cd04146
    Location:37 → 207
    RERG_RasL11_like; Ras-related and Estrogen-Regulated Growth inhibitor (RERG) and Ras-like 11 (RasL11)-like families
Nucleotide Protein Strain
Heading Accession and Version

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