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hibch 3-hydroxyisobutyryl-CoA hydrolase [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112155469, updated on 15-Mar-2024

Summary

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Gene symbol
hibch
Gene description
3-hydroxyisobutyryl-CoA hydrolase
See related
Ensembl:ENSOMEG00000021921
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG21
Exon count:
14
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG21 NC_050532.1 (10833801..10850242)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096091.1 (15197369..15215254, complement)

Linkage Group LG21 - NC_050532.1Genomic Context describing neighboring genes Neighboring gene lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) Neighboring gene zinc transporter 7 Neighboring gene myostatin b Neighboring gene PMS1 homolog 1, mismatch repair system component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyisobutyryl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in valine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050532.1 Reference ASM292280v2 Primary Assembly

    Range
    10833801..10850242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024287112.2 → XP_024142880.1  3-hydroxyisobutyryl-CoA hydrolase, mitochondrial

    UniProtKB/TrEMBL
    A0A3B3CQF3, A0A834FQX3
    Related
    ENSOMEP00000020092.1
    Conserved Domains (1) summary
    pfam16113
    Location:42 → 370
    ECH_2; Enoyl-CoA hydratase/isomerase
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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