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comtd1 catechol-O-methyltransferase domain containing 1 [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112154178, updated on 15-Mar-2024

Summary

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Gene symbol
comtd1
Gene description
catechol-O-methyltransferase domain containing 1
See related
Ensembl:ENSOMEG00000013722
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
zebrafish all
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Genomic context

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See comtd1 in Genome Data Viewer
Location:
chromosome: LG19
Exon count:
8
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG19 NC_050530.1 (11153788..11157974, complement)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096090.1 (9613831..9618013, complement)

Linkage Group LG19 - NC_050530.1Genomic Context describing neighboring genes Neighboring gene voltage-dependent anion-selective channel protein 2 Neighboring gene sterile alpha motif domain containing 8 Neighboring gene zinc finger protein 503 Neighboring gene calcium-activated potassium channel subunit alpha-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
catechol O-methyltransferase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050530.1 Reference ASM292280v2 Primary Assembly

    Range
    11153788..11157974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024284928.2 → XP_024140696.1  catechol O-methyltransferase domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3B3C331, A0A834KXE0
    Related
    ENSOMEP00000012351.1
    Conserved Domains (1) summary
    cl17173
    Location:57 → 254
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_024284929.2 → XP_024140697.1  catechol O-methyltransferase domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A834KXE0
    Conserved Domains (1) summary
    cl17173
    Location:25 → 222
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. XM_024284926.2 → XP_024140694.1  catechol O-methyltransferase domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A834KXE0
    Conserved Domains (1) summary
    cl17173
    Location:59 → 256
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein Strain
Heading Accession and Version

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