U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ccdc66 coiled-coil domain containing 66 [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112151988, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ccdc66
Gene description
coiled-coil domain containing 66
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ccdc66 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
19
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG6 NC_050517.1 (17802883..17814783, complement)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096088.1 (17341322..17353222)

Linkage Group LG6 - NC_050517.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S23 Neighboring gene transcription activation suppressor a Neighboring gene lactase-like b Neighboring gene small nucleolar RNA SNORD16 Neighboring gene zwilch kinetochore protein Neighboring gene ribosomal protein L4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
coiled-coil domain-containing protein 66

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050517.1 Reference ASM292280v2 Primary Assembly

    Range
    17802883..17814783 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024281179.2 → XP_024136947.1  coiled-coil domain-containing protein 66

    UniProtKB/TrEMBL
    A0A834C8S6
    Conserved Domains (1) summary
    cl25742
    Location:378 → 477
    ERM; Ezrin/radixin/moesin family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.