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dimt1l DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112148387, updated on 15-Mar-2024

Summary

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Gene symbol
dimt1l
Gene description
DIM1 dimethyladenosine transferase 1-like (S. cerevisiae)
See related
Ensembl:ENSOMEG00000005237
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Also known as
dimt1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG9
Exon count:
12
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG9 NC_050520.1 (19715742..19719016)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096084.1 (13571085..13574333, complement)

Linkage Group LG9 - NC_050520.1Genomic Context describing neighboring genes Neighboring gene homer scaffold protein 1b Neighboring gene junction-mediating and -regulatory protein Neighboring gene centromere protein H Neighboring gene kinesin-like protein KIF2A Neighboring gene unc-45 myosin chaperone B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA (adenine-N6,N6-)-dimethyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable dimethyladenosine transferase
Names
DIM1 dimethyladenosine transferase 1 homolog
DIMT1 rRNA methyltransferase and ribosome maturation factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050520.1 Reference ASM292280v2 Primary Assembly

    Range
    19715742..19719016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024275484.2 → XP_024131252.1  probable dimethyladenosine transferase

    UniProtKB/TrEMBL
    A0A3B3BGI3
    Related
    ENSOMEP00000004294.1
    Conserved Domains (1) summary
    PTZ00338
    Location:19 → 305
    PTZ00338; dimethyladenosine transferase-like protein; Provisional
Nucleotide Protein Strain
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Gene LinkOut

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