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unga uracil DNA glycosylase a [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112148039, updated on 15-Mar-2024

Summary

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Gene symbol
unga
Gene description
uracil DNA glycosylase a
See related
Ensembl:ENSOMEG00000002265
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Also known as
ung
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: LG9
Exon count:
7
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG9 NC_050520.1 (18823941..18826695)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096084.1 (14463392..14466118, complement)

Linkage Group LG9 - NC_050520.1Genomic Context describing neighboring genes Neighboring gene SV2 related protein a Neighboring gene ubiquitin specific peptidase 30 Neighboring gene alkB homolog 2, alpha-ketoglutarate dependent dioxygenase Neighboring gene peroxisomal membrane protein 2 Neighboring gene polyubiquitin-B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables uracil DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in base-excision repair, AP site formation via deaminated base removal IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uracil DNA glycosylase a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050520.1 Reference ASM292280v2 Primary Assembly

    Range
    18823941..18826695
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024274822.2 → XP_024130590.1  uracil DNA glycosylase a

    UniProtKB/TrEMBL
    A0A3B3CXX0, A0A834CC98
    Related
    ENSOMEP00000022638.1
    Conserved Domains (2) summary
    PRK05254
    Location:80 → 294
    PRK05254; uracil-DNA glycosylase; Provisional
    pfam05719
    Location:30 → 76
    GPP34; Golgi phosphoprotein 3 (GPP34)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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