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eef2kmt eukaryotic elongation factor 2 lysine methyltransferase [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112146577, updated on 15-Mar-2024

Summary

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Gene symbol
eef2kmt
Gene description
eukaryotic elongation factor 2 lysine methyltransferase
See related
Ensembl:ENSOMEG00000014009
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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See eef2kmt in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
8
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG8 NC_050519.1 (61070..63386)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096082.1 (23686080..23688383, complement)

Linkage Group LG8 - NC_050519.1Genomic Context describing neighboring genes Neighboring gene NACHT, LRR and PYD domains-containing protein 12 Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class Q Neighboring gene ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase Neighboring gene uncharacterized LOC112146167 Neighboring gene linkage group 8 C16orf89 homolog Neighboring gene intraflagellar transport 70 Neighboring gene uncharacterized si:ch211-76l23.4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
protein-lysine N-methyltransferase EEF2KMT

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050519.1 Reference ASM292280v2 Primary Assembly

    Range
    61070..63386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024272475.2 → XP_024128243.1  protein-lysine N-methyltransferase EEF2KMT isoform X1

    UniProtKB/TrEMBL
    A0A3B3C4V9
    Related
    ENSOMEP00000012619.1
    Conserved Domains (2) summary
    pfam14904
    Location:7 → 96
    FAM86; Family of unknown function
    cl17173
    Location:129 → 278
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_036213076.1 → XP_036068969.1  protein-lysine N-methyltransferase EEF2KMT isoform X2

    UniProtKB/TrEMBL
    A0A3B3C4V9
    Conserved Domains (2) summary
    pfam14904
    Location:6 → 97
    FAM86; Family of unknown function
    cl17173
    Location:128 → 277
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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