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fkbp14 FKBP prolyl isomerase 14 [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112143123, updated on 15-Mar-2024

Summary

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Gene symbol
fkbp14
Gene description
FKBP prolyl isomerase 14
See related
Ensembl:ENSOMEG00000020616
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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See fkbp14 in Genome Data Viewer
Location:
chromosome: LG16
Exon count:
4
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG16 NC_050527.1 (10502447..10503881, complement)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096078.1 (10505151..10506557, complement)

Linkage Group LG16 - NC_050527.1Genomic Context describing neighboring genes Neighboring gene carboxypeptidase vitellogenic like Neighboring gene chimerin 2 Neighboring gene pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 Neighboring gene collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peptidyl-prolyl cis-trans isomerase FKBP14
Names
FK506 binding protein 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050527.1 Reference ASM292280v2 Primary Assembly

    Range
    10502447..10503881 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024266872.2 → XP_024122640.1  peptidyl-prolyl cis-trans isomerase FKBP14 isoform X1

    UniProtKB/TrEMBL
    A0A3B3CLY4
    Related
    ENSOMEP00000018867.1
    Conserved Domains (2) summary
    pfam00254
    Location:46 → 139
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
    cl08302
    Location:152 → 212
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  2. XM_024266873.2 → XP_024122641.1  peptidyl-prolyl cis-trans isomerase FKBP14 isoform X2

    Conserved Domains (2) summary
    pfam00254
    Location:1 → 37
    FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
    pfam13499
    Location:47 → 110
    EF-hand_7; EF-hand domain pair
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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