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cep70 centrosomal protein 70 [ Oryzias melastigma (Indian medaka) ]

Gene ID: 112141998, updated on 15-Mar-2024

Summary

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Gene symbol
cep70
Gene description
centrosomal protein 70
See related
Ensembl:ENSOMEG00000010898
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias melastigma
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG2
Exon count:
17
Annotation release Status Assembly LG Location
101 current ASM292280v2 (GCF_002922805.2) LG2 NC_050513.1 (19809014..19815049)
100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020103920.1 (222785..229025)

Linkage Group LG2 - NC_050513.1Genomic Context describing neighboring genes Neighboring gene adenosine deaminase RNA specific B1a Neighboring gene uncharacterized LOC112141999 Neighboring gene SON DNA and RNA binding protein Neighboring gene cholinergic receptor, muscarinic 4a Neighboring gene uncharacterized LOC118599892

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gamma-tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 70 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM292280v2 Primary Assembly

Genomic

  1. NC_050513.1 Reference ASM292280v2 Primary Assembly

    Range
    19809014..19815049
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036216176.1 → XP_036072069.1  centrosomal protein of 70 kDa isoform X2

    UniProtKB/TrEMBL
    A0A3B3BX96, A0A3B3DF66
    Conserved Domains (1) summary
    TIGR02168
    Location:43 → 171
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. XM_024265227.2 → XP_024120995.1  centrosomal protein of 70 kDa isoform X1

    UniProtKB/TrEMBL
    A0A3B3BX96
    Related
    ENSOMEP00000009668.1
    Conserved Domains (1) summary
    cl25732
    Location:60 → 188
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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